JSONPDF

Ruminococcus primiciens

Citation

Formal styling
Ruminococcus primiciens corrig. Moraïs et al., 2024
Effective publication
Moraïs et al., 2024
Corrigendum
In SeqCode Registry from “Ruminococcus primaciens” (sic)
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:636yhucc (validated)
Canonical URL
https://seqco.de/i:23986

Nomenclature

Rank
Species
Syllabication
pri.mi.ci'ens
Etymology
L. masc. adj. primus, the first; L. pres. part. ciens, rousing; N.L. part. adj. primiciens, the first to rise, a likely ancestor species
Nomenclatural type
NCBI Assembly: GCA_037465745.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Monkey and human gut bacteria
Classification
Bacteria » Bacillota » Clostridia » Eubacteriales » Oscillospiraceae » Ruminococcus » Ruminococcus primiciens
Parent
Ruminococcus
Pseudonyms
  • Ruminococcus primaciens (Original, corrected name)

Genomics

Accession
NCBI Assembly:GCA_037465745.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.95%
  • Contamination: 2.46%
  • Quality: 80.65
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 14 amino acids
Sequencing depth
92.95 ×
Source
Other features
  • G+C Content: 37.5%
  • Coding Density: 87.48%
  • Codon Table: 11
  • N50: 23,482 bp
  • Contigs: 128
  • Largest Contig: 61,525 bp
  • Assembly Length: 2,023,970 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Morais, Sarah almost 2 years ago
Submitted by
Morais, Sarah 8 months ago
Curators
Validated by
Palmer, Marike 7 months ago
Date of priority
2024-03-27 09:19 AM (UTC)

Publications
1

Citation Title
Moraïs et al., 2024, Science Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans
Effective publication


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license