JSONPDF

Methanoplasma porotermitis

Citation

Formal styling
Methanoplasma porotermitis Protasov et al., 2023 (valid 2024)
Effective publication
Protasov et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hfttq0ec (validated)
Canonical URL
https://seqco.de/i:32528

Nomenclature

Rank
Species
Syllabication
po.ro.ter'mi.tis
Etymology
N.L. gen. n. porotermitis, referring to Porotermes, the host genus
Nomenclatural type
NCBI Assembly: GCA_031290095.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species identified by metagenomic analyses. The G+C content of the type genome is 57.3%, and the estimated genome size is 1.69 Mbp.
Classification
Archaea » Methanobacteriota » Thermoplasmata » Methanomassiliicoccales » Methanomethylophilaceae » Methanoplasma » Methanoplasma porotermitis
Parent
Methanoplasma

Genomics

Accession
NCBI Assembly:GCA_031290095.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.6%
  • Contamination: 0.0%
  • Quality: 95.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
96.0 ×
Source
Other features
  • G+C Content: 57.3%
  • Coding Density: 87.46%
  • Codon Table: 11
  • N50: 27,838 bp
  • Contigs: 97
  • Largest Contig: 72,165 bp
  • Assembly Length: 1,618,761 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Protasov, Evgenii about 1 year ago
Submitted by
Protasov, Evgenii 7 months ago
Curators
Validated by
Rodriguez-R, Luis M 5 months ago
Date of priority
2024-04-16 06:48 PM (UTC)

Publications
1

Citation Title
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Effective publication


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license