Vibrio tetraodonis

Citation

Formal styling

Vibrio tetraodonis Azevedo et al., 2021 (valid 2023)

Effective publication

Azevedo et al., 2021

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:1_urr4c2 (validated)

Canonical URL

https://seqco.de/i:32636

Nomenclature

Rank

Species

Syllabication

tet'rao.do.nis

Etymology

L. gen. n. tetraodonis, of Tetraodon, a genus of plectognathic fishes (Tetraodontidae)

Nomenclatural type

NCBI Assembly: GCA_003350295.1

Reference strain

A511T = CBAS 712T = CAIM 1939T

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Gram-negative, motile, circular-shaped bacterial strain. Optimum growth occurs at
20–28 °C in the presence of 3% NaCl.

Classification

Bacteria » Pseudomonadota » Gammaproteobacteria » Vibrionales » Vibrionaceae » Vibrio » Vibrio tetraodonis

Parent

Vibrio ncbigtdb

Children (1)

• “Vibrio tetraodonis subsp. pristinus” ncbi

Genomics

Accession

NCBI Assembly:GCA_003350295.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 1.9%
• Quality: 90.5

Ribosomal and transfer RNA genes

• 3 16S rRNAs (up to 53.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

145.0 ×

Source

• BioSample: SAMN09437379

Other features

• G+C Content: 42.5%
• Coding Density: 87.69%
• Codon Table: 11
• N50: 183,738 bp
• Contigs: 41
• Largest Contig: 460,678 bp
• Assembly Length: 4,360,861 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• NCBI Taxonomy: 2231647
• GTDB Genome: GCA_003350295.1
• GTDB Tree: s__Vibrio tetraodonis
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Vibrio tetraodonis (see reference source)

Search sequences

• Seach in NCBI Nucleotide
• NCBI Genomes table

Local history

• This name was last modified 10 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Kaufmann, Hannah about 1 year ago

Submitted by

Kaufmann, Hannah 11 months ago

Curators

• Rodriguez-R, Luis M
• Palmer, Marike

Validated by

Rodriguez-R, Luis M 10 months ago

Date of priority

2023-12-08 12:20 AM (UTC)