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Foliamicus numerosusTs

Citation

Formal styling
Foliamicus numerosusTs Nguyen et al., 2023 (priority 2024)
Effective publication
Nguyen et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:icd0lna9 (validated)
Canonical URL
https://seqco.de/i:44973 Copy

Nomenclature

Rank
Species
Syllabication
numerosus
Etymology
L. masc. adj. numerosus, numerous
Nomenclatural type
INSDC Nucleotide: JAPYNE000000000
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A gammaproteobacterial symbiont of sponges
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Foliamicales » Foliamicaceae » Foliamicus » Foliamicus numerosusTs
Parent
Foliamicus gtdb assigned in Nguyen et al., 2023

Genomics

Accession
INSDC Nucleotide:JAPYNE000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.5%
  • Contamination: 1.9%
  • Quality: 82.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 79.0%)
  • 1 23S rRNA (up to 61.0%)
  • tRNAs for 20 amino acids
Sequencing depth
20.0 ×
Source
Other features
  • G+C Content: 63.76%
  • Coding Density: 89.58%
  • Codon Table: 11
  • N50: 49,677 bp
  • Contigs: 66
  • Largest Contig: 207,179 bp
  • Assembly Length: 2,210,887 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimates are based on MIGA.
Automated checks
Complete
See additional details
Last modified 6 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Thomas, Torsten, created 12 months ago
Submitted by
Thomas, Torsten 11 months ago
Curators
Endorsed by
Palmer, Marike 11 months ago
Validated by
Rodriguez-R, Luis M 10 months ago
Date of priority
2024-06-18 12:11 AM (UTC)

Publications
1

Citation Title
Nguyen et al., 2023, Systematic and Applied Microbiology Functional characterization and taxonomic classification of novel gammaproteobacterial diversity in sponges
Effective publication
Assigned this taxon


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