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Azosocius agrariusTs

Citation

Formal styling
Azosocius agrariusTs (ex He et al., 2021) Speth et al., 2024
Effective publication
Speth et al., 2024
Original (not valid) publication
He et al., 2021
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:rlsqwca1 (validated)
Canonical URL
https://seqco.de/i:49078

Nomenclature

Rank
Species
Syllabication
a.gra.ri'us
Etymology
L. masc. adj. agrarius, of the land or field
Nomenclatural type
NCBI Assembly: GCA_016432505.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
’Azosocius agrarius’ (L. masc. adj. agrarius, of the soil). A bacterial species identified by metagenomic analyses. This species includes all bacteria with genomes that show ≥95% average nucleotide identity to the type genome for the species to which is available via NCBI BioSample SAMN15435421 and NCBI GenBank accession GCA_016432505.1.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Azoamicales » Azoamicaceae » Azosocius » Azosocius agrariusTs
Parent
Azosocius

Genomics

Accession
NCBI Assembly:GCA_016432505.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 2 23S rRNAs (up to 90.0%)
  • tRNAs for 20 amino acids
Sequencing depth
22.4 ×
Source
Other features
  • G+C Content: 22.5%
  • Coding Density: 91.79%
  • Codon Table: 11
  • N50: 352,596 bp
  • Contigs: 1
  • Largest Contig: 352,596 bp
  • Assembly Length: 352,596 bp
  • Ambiguous Assembly Fraction: 0.028%
Submitter comments
Circular endosymbiont genome. Completeness and contamination based on the circularity, not marker gene content
Automated checks
Complete
See additional details
Last modified about 2 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Speth, Daan, created 3 months ago
Submitted by
Speth, Daan 2 months ago
Curators
Validated by
Palmer, Marike 13 days ago
Date of priority
2024-11-11 08:18 AM (UTC)

Publications
2

Citation Title
Speth et al., 2024, Nature Communications Genetic potential for aerobic respiration and denitrification in globally distributed respiratory endosymbionts
Effective publication
He et al., 2021, Nature Microbiology Genome-resolved metagenomics reveals site-specific diversity of episymbiotic CPR bacteria and DPANN archaea in groundwater ecosystems
Original (not valid) publication


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