Here, we report the draft, nearly complete genome sequence of the human oral actinobacterium
Schaalia odontolytica
strain ORNL0103, which was isolated in association with “
Candidatus
Saccharibacteria” HMT352 strain ORNL0105. The genome was sequenced using a combination of Pacific Biosciences and Illumina platforms and encodes 1,948 proteins and 60 RNAs.