SeqCode Registry
cognitis nomina
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Genomes
sc|0000612
JSON
Genome sc|0000612
Name
Methanocatella smithii
Ts
Database
NCBI Assembly
Accession
GCF_000016525.1
Genomics
Accession
NCBI Assembly:
GCF_000016525.1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
0.0%
Quality:
100.0
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 100.0%)
2 23S rRNAs (up to 100.0%)
tRNAs for 19 amino acids
Sequencing depth
100.0 ×
Source
BioSample: SAMN02604313
Other features
G+C Content:
31.03%
Coding Density:
89.96%
Codon Table:
11
N50:
1,853,160 bp
Contigs:
1
Largest Contig:
1,853,160 bp
Assembly Length:
1,853,160 bp
Ambiguous Assembly Fraction:
0.0%
Submitter comments
Methanobrevibacter smithii
Automated checks
Complete
Last modified
about 1 month ago
Sample Metadata
BioSample entries
BioSample: SAMN02604313
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Ncbi Submission Package:
Generic.1.0
Biosamplemodel:
Generic
All retrieved samples
SAMN02604313
: Sample from Methanobrevibacter smithii ATCC 35061
Metadata retrieved
about 1 month ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN02604313
×
Metadata retrieved using the EBI API
BioSample Accession(s)
SAMN02604313
strain
ATCC 35061; PS; DSMZ 861
note
type strain of Methanobrevibacter smithii
type-material
type strain of Methanobrevibacter smithii
NCBI submission package
Generic.1.0
organism
Methanobrevibacter smithii ATCC 35061
BioSampleModel
Generic
ENA-FIRST-PUBLIC
2014-01-30
ENA-LAST-UPDATE
2019-06-20
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