SeqCode Registry
cognitis nomina
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Genomes
sc|0000767
JSON
Genome sc|0000767
Name
Bathycorpusculum fermentans
Database
NCBI Assembly
Accession
GCA_009787175.1
Genomics
Accession
NCBI Assembly:
GCA_009787175.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
98.13%
Contamination:
4.67%
Quality:
74.78
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 18 amino acids
Sequencing depth
21.3 ×
Source
BioSample: SAMN12582009
BioSample: SAMN03344608
Other features
G+C Content:
38.88%
Coding Density:
82.53%
Codon Table:
11
N50:
12,206 bp
Contigs:
173
Largest Contig:
37,405 bp
Assembly Length:
1,587,817 bp
Ambiguous Assembly Fraction:
0.0%
Submitter comments
CheckM and TRNAscan-SE 2.0 were used to assess genome quality and number of tRNAs.
Automated checks
Complete
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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