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Bathycorpusculum grumuli

Citation

Formal styling
Bathycorpusculum grumuli Protasov et al., 2023 (valid 2024)
Effective publication
Protasov et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hfttq0ec (validated)
Canonical URL
https://seqco.de/i:32525

Nomenclature

Rank
Species
Syllabication
gru'mu.li
Etymology
L. gen. n. grumuli, of a little hill
Nomenclatural type
NCBI Assembly: GCA_009776805.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species identified by metagenomic analyses. The G+C content of the type genome is 35.5 mol%, and the estimated genome size is 2.30 Mbp.
Classification
Archaea » “Bathyarchaeota” » Bathyarchaeia » Bathyarchaeales » Bathycorpusculaceae » Bathycorpusculum » Bathycorpusculum grumuli
Parent
Bathycorpusculum

Genomics

Accession
NCBI Assembly:GCA_009776805.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.07%
  • Contamination: 3.74%
  • Quality: 80.37
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
396.5 ×
Source
Other features
  • G+C Content: 35.58%
  • Coding Density: 74.83%
  • Codon Table: 11
  • N50: 20,545 bp
  • Contigs: 173
  • Largest Contig: 71,829 bp
  • Assembly Length: 2,287,482 bp
  • Ambiguous Assembly Fraction: 0.0025%
Submitter comments
CheckM and TRNAscan-SE 2.0 were used to assess genome quality and number of tRNAs. 
Automated checks
Complete
See additional details
Last modified 4 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Protasov, Evgenii about 1 year ago
Submitted by
Protasov, Evgenii 7 months ago
Curators
Endorsed by
Chuvochina, Maria about 1 year ago
Validated by
Rodriguez-R, Luis M 6 months ago
Date of priority
2024-04-16 06:48 PM (UTC)

Publications
1

Citation Title
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Effective publication


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