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Bathycorpusculum fermentans

Citation

Formal styling
Bathycorpusculum fermentans Protasov et al., 2023 (valid 2024)
Effective publication
Protasov et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hfttq0ec (validated)
Canonical URL
https://seqco.de/i:32520

Nomenclature

Rank
Species
Syllabication
fer.men'tans
Etymology
L. part. adj. fermentans, fermenting
Nomenclatural type
NCBI Assembly: GCA_009787175.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species identified by metagenomic analyses. The G+C content of the type genome is 37.8 mol%, and the estimated genome size is 1.86 Mbp.
Classification
Archaea » “Bathyarchaeota” » Bathyarchaeia » Bathyarchaeales » Bathycorpusculaceae » Bathycorpusculum » Bathycorpusculum fermentans
Parent
Bathycorpusculum

Genomics

Accession
NCBI Assembly:GCA_009787175.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.13%
  • Contamination: 4.67%
  • Quality: 74.78
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 18 amino acids
Sequencing depth
21.3 ×
Source
Other features
  • G+C Content: 38.88%
  • Coding Density: 82.53%
  • Codon Table: 11
  • N50: 12,206 bp
  • Contigs: 173
  • Largest Contig: 37,405 bp
  • Assembly Length: 1,587,817 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
CheckM and TRNAscan-SE 2.0 were used to assess genome quality and number of tRNAs. 
Automated checks
Complete
See additional details
Last modified 6 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Protasov, Evgenii about 1 year ago
Submitted by
Protasov, Evgenii 7 months ago
Curators
Endorsed by
Chuvochina, Maria about 1 year ago
Validated by
Rodriguez-R, Luis M 6 months ago
Date of priority
2024-04-16 06:48 PM (UTC)

Publications
1

Citation Title
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Effective publication


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