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Palauibacter denitrificans

Citation

Formal styling
Palauibacter denitrificans Aldeguer-Riquelme et al., 2023
Effective publication
Aldeguer-Riquelme et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:0hkazsoc (validated)
Canonical URL
https://seqco.de/i:23791 Copy

Nomenclature

Rank
Species
Syllabication
de.ni.tri.fi'cans
Etymology
N.L. v. denitrifico, to denitrify; N.L. masc. part. adj. denitrificans, denitrifying
Nomenclatural type
NCBI Assembly: GCA_009841015.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Classification
Bacteria » Gemmatimonadota » Gemmatimonadetes » Palauibacterales » Palauibacteraceae » Palauibacter » Palauibacter denitrificans
Parent
Palauibacter gtdb

Genomics

Accession
NCBI Assembly:GCA_009841015.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.54%
  • Contamination: 3.3%
  • Quality: 79.04
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 17 amino acids
Source
Other features
  • G+C Content: 69.1%
  • Coding Density: 92.76%
  • Codon Table: 11
  • N50: 27,076 bp
  • Contigs: 219
  • Largest Contig: 77,618 bp
  • Assembly Length: 3,760,526 bp
  • Ambiguous Assembly Fraction: 0.01%
Submitter comments
Genome quality has been evaluated with checkM, presence of 16S rRNA gene was checked with sortmerna and tRNA were identified using tRNAscan
Automated checks
Complete
See additional details
Last modified 9 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 2 years ago by Aldeguer-Riquelme, Borja
Submitted
Over 2 years ago by Aldeguer-Riquelme, Borja
Curators
Endorsed
Over 2 years ago by Chuvochina, Maria
Validated
About 2 years ago by Chuvochina, Maria
Date of priority
2023-06-23 07:38 AM (UTC)

Publications
1

Citation Title
Aldeguer-Riquelme et al., 2023, mSystems Distribution, abundance, and ecogenomics of the Palauibacterales , a new cosmopolitan thiamine-producing order within the Gemmatimonadota phylum
Effective publication


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seqco.de/r:0hkazsoc