Pseudothioglobus singularisTs


Citation

Formal styling
Pseudothioglobus singularisTs van Vliet et al., 2021 (valid 2024)
Effective publication
van Vliet et al., 2021
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:a7urrcua (validated)
Cannonical URL
https://seqco.de/i:31963

Nomenclature

Rank
Species
Syllabication
sin.gu.la'ris
Etymology
L. masc. adj. singularis, alone, singular
Nomenclatural type
NCBI Assembly: GCA_001281385.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The description is the same as given originally by Marshall, Morris, 2013 since van Vliet et al. (2021) proposed new genus name based on the same type species:
We propose the provisional taxonomic assignment ‘Candidatus: Thioglobus singularis’, alluding to the clade’s known role in sulfur oxidation and the Isolate’s planktonic lifestyle. Thioglobus gen. nov. Thioglobus singularis sp. nov. Etymology. thios (Gr. noun): sulfur, globus (L. masc. noun): ball, sphere, globe. Singularis (L. adj.): alone, singular. The Genus name alludes to the clade’s ability to oxidize sulfur and to the sulfur globules found on the outside of the cells. The species name alludes to the fact that this is a free-living member of the clade, rather than a symbiont. Locality: surface waters in Puget Sound. Diagnosis: a small mesophilic sulfur oxidizer from the gamma proteobacteria.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » “Gammaproteobacteria_incertae_sedis” » Pseudothioglobaceae » Pseudothioglobus » Pseudothioglobus singularisTs
Parent
Pseudothioglobus gtdb assigned in Marshall, Morris, 2013

Genomics

Accession
NCBI Assembly:GCA_001281385.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.68%
  • Contamination: 0.0%
  • Quality: 98.68
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
2000.0 ×
Source
Other features
  • G+C Content: 37.44%
  • Coding Density: 94.06%
  • Codon Table: 11
  • N50: 1,714,148 bp
  • Contigs: 1
  • Largest Contig: 1,714,148 bp
  • Assembly Length: 1,714,148 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Chuvochina, Maria 11 months ago
Submitted by
Chuvochina, Maria 3 months ago
Curators
Validated by
Rodriguez-R, Luis M 2 months ago
Date of priority
2024-03-28 05:31 AM (UTC)

Publications
2

Citation Title
van Vliet et al., 2021, Environmental Microbiology The bacterial sulfur cycle in expanding dysoxic and euxinic marine waters
Effective publication
Marshall, Morris, 2013, The ISME Journal Isolation of an aerobic sulfur oxidizer from the SUP05/Arctic96BD-19 clade
Assigned this taxon



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