Lustribacter telmatis^Ts

Citation

Formal styling

Lustribacter telmatis^Ts Ji et al., 2021 (valid 2024)

Effective publication

Ji et al., 2021

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:tgimo_87 (validated)

Canonical URL

https://seqco.de/i:42845

Nomenclature

Rank

Species

Syllabication

tel'ma.tis

Etymology

Gr. n. telma, swamp; N.L. gen. n. telmatis, of the bog

Nomenclatural type

NCBI Assembly: GCA_003164045.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Obligate heterotroph. Hydrogen oxidation using Group 1h [NiFe] hydrogenase. Anaerobic respiration: urocanate. Organic substrates include peptides, amino acids, carboxylates, taurine, urea, cyanate, acetate, formate, alcohols (including methanol, ethanol), arylsulfates, alkanesulfonates, oligosaccharides, sugars, fluoroacetate, halobenzoate, phenoxypropionate, ethylbenzene, 4-hydroxybenzoate, 4-sulfocatechol. PHA storage; glycogen storage. Motile by flagella. Polyphosphate storage. Also defined based on ANI, and phylogenies of 16S rRNA gene, 15 ribosomal proteins, and the GTDB.

Classification

Bacteria » Eremiobacterota » Eremiobacteria » “Baltobacterales” » “Baltobacteraceae” » Lustribacter » Lustribacter telmatis^Ts

Parent

Lustribacter gtdb

Genomics

Accession

NCBI Assembly:GCA_003164045.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.5%
• Contamination: 3.8%
• Quality: 73.5

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 20 amino acids

Sequencing depth

61.8 ×

Source

• BioSample: SAMN08179990
• BioSample: SAMN07125045

Other features

• G+C Content: 64.13%
• Coding Density: 94.68%
• Codon Table: 11
• N50: 94,456 bp
• Contigs: 102
• Largest Contig: 397,077 bp
• Assembly Length: 4,994,123 bp
• Ambiguous Assembly Fraction: 0.049%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_003164045.1
• GTDB Tree: s__Lustribacter telmatis
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Lustribacter telmatis (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 8 days ago
• Submission process status
• Quality checks before valid publication

Registered by

Ferrari, Belinda 3 months ago

Submitted by

Ferrari, Belinda 2 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Palmer, Marike 8 days ago

Date of priority

2024-10-17 12:47 AM (UTC)