Nitrosomaritimum yanchengense

Citation

Formal styling

Nitrosomaritimum yanchengense corrig. Zhao et al., 2024

Effective publication

Zhao et al., 2024

Corrigendum

In SeqCode Registry from “Nitrosomaritimum yanchengensis” (sic)

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:bzk8d90a (validated)

Canonical URL

https://seqco.de/i:48840

Nomenclature

Rank

Species

Syllabication

yan.cheng.en'se

Etymology

N.L. neut. adj. yanchengense, referring to this organism first identified in intertidal aquifers of Yancheng Wetland

Nomenclatural type

NCBI Assembly: GCA_042138165.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The "yanchengensis" indicates the first metagenome-assembled genome (MAG) of this species was recovered from the intertidal aquifers of Yancheng Wetland.

Classification

Archaea » Thermoproteota » Nitrososphaeria » Nitrosopumilales » Nitrosopumilaceae » Nitrosomaritimum » Nitrosomaritimum yanchengense

Parent

Nitrosomaritimum

Pseudonyms

• Nitrosomaritimum yanchengensis (Original, corrected name)

Genomics

Accession

NCBI Assembly:GCA_042138165.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 90.03%
• Contamination: 2.73%
• Quality: 76.38

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 17 amino acids

Sequencing depth

10.0 ×

Source

• BioSample: SAMN43471738

Other features

• G+C Content: 34.42%
• Coding Density: 87.65%
• Codon Table: 11
• N50: 3,916 bp
• Contigs: 436
• Largest Contig: 17,102 bp
• Assembly Length: 1,495,043 bp
• Ambiguous Assembly Fraction: 0.076%

Automated checks

Complete

See additional details

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Last modified 4 days ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_042138165.1
• Wikispecies: Nitrosomaritimum yanchengense (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified about 1 month ago
• Submission process status
• Quality checks before valid publication

Registered by

Zhao, Ze 3 months ago

Submitted by

Zhao, Ze about 2 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M about 1 month ago

Date of priority

2024-09-27 01:59 PM (UTC)