Thiothrix phosphatis


Citation

Formal styling
Thiothrix phosphatis Chen et al., 2024 (priority 2026)
Effective publication
Chen et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:dj3crgg3 (validated)
Canonical URL
https://seqco.de/i:49035

Nomenclature

Rank
Species
Syllabication
phos.pha'tis
Etymology
N.L. gen. n. phosphatis, pertaining to phosphate
Nomenclatural type
NCBI Assembly: GCA_035668035.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Chen et al. (2024), modified: A novel coccus Thiothrix-related polyphosphate-accumulating organism recovered from an acetate-fed enhanced biological phosphorus removal systen in a lab-scale sequencing batch reactor innoculated with activated sludge from a wastewater treatment plant in Guangzhou, China.
Its acetate uptake rate (6.20 mmol C/g VSS/h) surpassed most Ca. Accumulibacter and known glycogen-accumulating organisms (GAOs), conferring their predominance in the acetate-fed system.
Metatranscriptomic analysis suggested that Thiothrix phosphatis SCUT-1 employed both low- and high-affinity pathways for acetate activation, and both the conventional (PhaABC) pathway and the fatty acid β-oxidation pathway for PHA synthesis; additionally, a much more efficient FAD-dependent malate: quinone oxidoreductase (MQO) were encoded and employed than the traditional malate dehydrogenase (MDH) to oxidize malate to oxaloacetate in the TCA and glyoxylate cycle, collectively contributing to a higher acetate utilization and processing rate of this microorganism. Batch tests further demonstrated the versatile ability of this PAO in using VFA (acetate, propionate, and butyrate), lactate, amino acids (aspartate and glutamate), and glucose as carbon sources for EBPR, showing a partially overlapped but unique ecological niche of this microorganism comparing to Ca. Accumulibacter and known GAOs.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Thiotrichales » Thiotrichaceae » Thiothrix » Thiothrix phosphatis
Parent
Thiothrix

Genomics

Accession
NCBI Assembly:GCA_035668035.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.2%
  • Contamination: 3.26%
  • Quality: 80.9
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 30.0%)
  • 1 23S rRNA (up to 61.0%)
  • tRNAs for 20 amino acids
Sequencing depth
8.9 ×
Source
Other features
  • G+C Content: 56.28%
  • Coding Density: 91.47%
  • Codon Table: 11
  • N50: 62,556 bp
  • Contigs: 165
  • Largest Contig: 228,037 bp
  • Assembly Length: 4,422,194 bp
  • Ambiguous Assembly Fraction: 0.061%
Submitter comments
Completeness and contamination determined with CheckM v.1.0.18
Automated checks
Complete

Last modified 6 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Almost 2 years ago and claimed 2 months ago by Nguyen, Huong
Submitted
19 days ago by Nguyen, Huong
Curators
Validated
7 days ago by Rodriguez-R, Luis M
Date of priority
2026-07-16 09:03 AM (UTC)

Publications
1

Citation Title
Chen et al., 2024, Water Research Candidatus Thiothrix phosphatis SCUT-1: A novel polyphosphate-accumulating organism abundant in the enhanced biological phosphorus removal system
Effective publication



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seqco.de/r:dj3crgg3