JSON

Genome sc|0002933

Name

Nitrosomaritimum yanchengense

Database

NCBI Assembly

Accession

GCA_042138165.1

Genomics

Accession
NCBI Assembly:GCA_042138165.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 90.03%
  • Contamination: 2.73%
  • Quality: 76.38
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 17 amino acids
Sequencing depth
10.0 ×
Source
Other features
  • G+C Content: 34.42%
  • Coding Density: 87.65%
  • Codon Table: 11
  • N50: 3,916 bp
  • Contigs: 436
  • Largest Contig: 17,102 bp
  • Assembly Length: 1,495,043 bp
  • Ambiguous Assembly Fraction: 0.076%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2020-08
Location
Lat Lon: 33.35 N 120.15 E
Toponym
Geo Loc Name: China: Yancheng Wetland, Jiangsu
Environment
Isolation Source: not applicable
Env Broad Scale: biome [ENVO:00000428]
Env Local Scale: intertidal zone [ENVO:00000316]
Env Medium: environmental material [ENVO:00010483]
Other
Depth: 0.05 m
Package
Ncbi Submission Package: MIMAG.sediment.6.0
Biosamplemodel: MIMAG.sediment
All retrieved samples
Metadata retrieved 18 days ago


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