Genome sc|0000408

Genomics

Accession

NCBI Assembly:GCA_900215435.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 0.19%
• Quality: 99.05

Ribosomal and transfer RNA genes

• 7 16S rRNAs (up to 100.0%)
• 7 23S rRNAs (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

70.0 ×

Source

• SRA: SRX3006580

Other features

• G+C Content: 53.52%
• Coding Density: 87.72%
• Codon Table: 11
• N50: 4,409,457 bp
• Contigs: 5
• Largest Contig: 4,409,457 bp
• Assembly Length: 5,453,142 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

Quality assessed with CheckM v. 1. rRNA prediction performed with barrnap v. 0.9, and tRNA prediction performed with tRNAscan-SE v. 2.0.9.

Automated checks

Complete

Sample Metadata

Date

Not detected

Location

Lat Lon: 28.7109 N 81.4862 W

Toponym

Geo Loc Name: USA: Florida, Wekiwa Springs State Park

Environment

Not detected

Other

Not detected

Package

Ncbi Submission Package: MIGS.ba.5.0

Biosamplemodel: MIGS.ba

All retrieved samples

• SRS2357071: Enterobacteriaceae sp. JKS000234

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Metadata retrieved 10 months ago