SeqCode Registry
cognitis nomina
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Genomes
sc|0000772
JSON
Genome sc|0000772
Name
Bathycorpusculum grumuli
Database
NCBI Assembly
Accession
GCA_009776805.1
Genomics
Accession
NCBI Assembly:
GCA_009776805.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
99.07%
Contamination:
3.74%
Quality:
80.37
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 19 amino acids
Sequencing depth
396.5 ×
Source
BioSample: SAMN12582180
BioSample: SAMN03344615
Other features
G+C Content:
35.58%
Coding Density:
74.83%
Codon Table:
11
N50:
20,545 bp
Contigs:
173
Largest Contig:
71,829 bp
Assembly Length:
2,287,482 bp
Ambiguous Assembly Fraction:
0.0025%
Submitter comments
CheckM and TRNAscan-SE 2.0 were used to assess genome quality and number of tRNAs.
Automated checks
Complete
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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