Methanocatella millerae

Citation

Formal styling

Methanocatella millerae Protasov et al., 2023 (valid 2024)

Effective publication

Protasov et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:hfttq0ec (validated)

Canonical URL

https://seqco.de/i:32435

Nomenclature

Rank

Species

Syllabication

mil'ler.ae

Etymology

N.L. gen. fem. n. millerae, of Miller, named after Terry L. Miller for her contributions to the taxonomy of methanogens, in particular the genus Methanobrevibacter

Nomenclatural type

NCBI Assembly: GCF_900103415.1

Reference strain

ZA-10 = DSM 16643

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Cells occur singly or in pairs or chains and are coccobacilli (0.5–1.2 µm) with rounded ends. Cells stain Gram-positive, are non-motile and are resistant to lysis by 10% SDS. Grows and produces methane from H2/CO2 and from formate plus CO2. The optimum temperature range for growth is 36–42 °C. pH range for growth is 5.5–10.0; optimum pH is 7.0–8.0. The maximum salt tolerance for growth is 2.6 % (as in Rea et al., 2007). The G+C content of the type genome is 36.5 mol%, and the genome size is 2.72 Mbp.

Classification

Archaea » Methanobacteriota » Methanobacteria » Methanobacteriales » Methanobacteriaceae » Methanocatella » Methanocatella millerae

Parent

Methanocatella

Alternative placements

• Methanobrevibacter assigned in Rea et al., 2007

Genomics

Accession

NCBI Assembly:GCF_900103415.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 0.0%
• Quality: 100.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

474.0 ×

Source

• BioSample: SAMN02910315

Other features

• G+C Content: 36.54%
• Coding Density: 89.47%
• Codon Table: 11
• N50: 112,462 bp
• Contigs: 48
• Largest Contig: 224,934 bp
• Assembly Length: 2,725,667 bp
• Ambiguous Assembly Fraction: 0.33%

Submitter comments

Methanobrevibacter millerae

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• GTDB Genome: GCF_900103415.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Methanocatella millerae (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 4 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Protasov, Evgenii about 1 year ago

Submitted by

Protasov, Evgenii 6 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 4 months ago

Date of priority

2024-04-16 06:48 PM (UTC)