Publications

4783

Abstract Me.tha.no.bre.vi.bac'ter. M.L. neut. n. methanum methane; L. masc. adj. brevis short; M.L. masc. n. bacter equivalent of Gr. neut. n. bakterion rod, staff; M.L. masc. n. Methanobrevibacter short methane (‐producing) rod. Oval rods or cocci to short rods , usually occurring in pairs or chains; about 0.5–0.7 µm in width and 0.8–1.4 µm in length. Rarely, filaments are formed. Nonsporing, Gram‐positive. Cell walls are composed of pseudomurein . Nonmotile. Strict anaerobes. Optimum temperature, 37–40°C; maximum, ~45°C; minimum, ~30°C. The mol % G + C of the DNA is : 27.5–31.6. Type species : Methanobrevibacter ruminantium (Smith and Hungate 1958) Balch and Wolfe 1981, 216 (Effective publication: Balch and Wolfe in Balch, Fox, Magrum, Woese and Wolfe, 1979, 284) ( Methanobacterium ruminantium Smith and Hungate 1958, 717). Taxonomic and Nomenclature Notes According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the genus Methanobrevibacter is: correct name (last update, February 2025) * . LPSN classification: Archaea / Methanobacteriati / Methanobacteriota / Methanobacteria / Methanobacteriales / Methanobacteriaceae / Methanobrevibacter The genus Methanobrevibacter can also be recovered in the Genome Taxonomy Database (GTDB) as g__Methanobrevibacter (version v220) ** . GTDB classification: d__Archaea / p__Methanobacteriota / c__Methanobacteria / o__Methanobacteriales / f__Methanobacteriaceae / g__Methanobrevibacter * Meier‐Kolthoff et al. ( 2022 ). Nucleic Acids Res , 50 , D801 – D807 ; DOI: 10.1093/nar/gkab902 ** Parks et al. ( 2022 ). Nucleic Acids Res , 50 , D785 – D794 ; DOI: 10.1093/nar/gkab776

Abstract A.my.co.la.top'sis. N.L. fem. n. Amycolata genus belonging to the order Actinomycetales ; Gr. fem. n. opsis aspect, appearance; N.L. fem. n. Amycolatopsis that which appears similar to Amycolata . Aerobic to facultatively anaerobic , Gram‐stain‐positive , non‐acid‐fast , nonmotile , catalase‐positive actinomycetes that form branching substrate hyphae which fragment into squarish and rod‐shaped elements . When formed , aerial hyphae may be sterile or differentiate into chains of smooth‐walled , squarish to ellipsoidal spore‐like structures . Chemo‐organotrophic to facultatively autotrophic. Grows on a broad range of organic and synthetic media. Mesophilic or thermophilic. Whole‐organism hydrolysates are rich in meso ‐2 , 6‐diaminopimelic acid , arabinose , and galactose . The peptidoglycan is of the A1γ type. Muramic acid moieties are N ‐acetylated. The diagnostic phospholipid is phosphatidylethanolamine ( with or without phosphatidylmethylethanolamine ) or phosphatidylmethylethanolamine with variable occurrence of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, and phosphatidylinositol mannosides; contains complex mixtures of saturated and branched chain fatty acids . Does not contain mycolic acids. The phylogenetic position of Amycolatopsis , as determined by 16S rRNA gene sequence analysis, is in the family Pseudonocardiaceae . Common in arid soils but has also been isolated from activated sludge, equine placentas, and from clinical and plant material. DNA G + C content ( mol %): 66–75 ( T m ; HPLC). Type species : Amycolatopsis orientalis (Pittenger and Brigham 1956) Lechevalier, Prauser, Labeda and Ruan 1986, 35 VP . Taxonomic and Nomenclature Notes According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the genus Amycolatopsis is: correct name (last update, February 2025) * . LPSN classification: Bacteria / Bacillati / Actinomycetota / Actinomycetes / Pseudonocardiales / Pseudonocardiaceae / Amycolatopsis The genus Amycolatopsis can also be recovered in the Genome Taxonomy Database (GTDB) as g__Amycolatopsis (version v220) ** . GTDB classification: d__Bacteria / p__Actinomycetota / c__Actinomycetes / o__Mycobacteriales / f__Pseudonocardiaceae / g__Amycolatopsis * Meier‐Kolthoff et al. ( 2022 ). Nucleic Acids Res , 50 , D801 – D807 ; DOI: 10.1093/nar/gkab902 ** Parks et al. ( 2022 ). Nucleic Acids Res , 50 , D785 – D794 ; DOI: 10.1093/nar/gkab776