Methanimicrococcus labiotermitis

Citation

Formal styling

Methanimicrococcus labiotermitis Protasov et al., 2023 (valid 2024)

Effective publication

Protasov et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:hfttq0ec (validated)

Canonical URL

https://seqco.de/i:32597

Nomenclature

Rank

Species

Syllabication

la.bi.o.ter'mi.tis

Etymology

N.L. gen. n. labiotermitis, referring to Labiotermes, the host genus

Nomenclatural type

NCBI Assembly: GCA_009784005.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The species identified by metagenomic analyses. The G+C content of the type genome is 45.5%, and the estimated genome size is 1.83 Mbp.

Classification

Archaea » Methanobacteriota » “Methanomicrobia” » Methanosarcinales » Methanosarcinaceae » Methanimicrococcus » Methanimicrococcus labiotermitis

Parent

Methanimicrococcus

Genomics

Accession

NCBI Assembly:GCA_009784005.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.14%
• Contamination: 0.0%
• Quality: 92.14

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 20 amino acids

Sequencing depth

24.0 ×

Source

• BioSample: SAMN12581897
• BioSample: SAMN13139697

Other features

• G+C Content: 45.53%
• Coding Density: 79.54%
• Codon Table: 11
• N50: 43,757 bp
• Contigs: 62
• Largest Contig: 82,997 bp
• Assembly Length: 1,688,578 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

CheckM and TRNAscan-SE 2.0 were used to assess genome quality and number of tRNAs. 

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_009784005.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Methanimicrococcus labiotermitis (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 7 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Protasov, Evgenii over 1 year ago

Submitted by

Protasov, Evgenii 8 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 7 months ago

Date of priority

2024-04-16 06:48 PM (UTC)