Litorirhabdus singularis^Ts

Citation

Formal styling

Litorirhabdus singularis^Ts Li et al., 2023 (valid 2024)

Effective publication

Li et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:ur0fqscc (validated)

Canonical URL

https://seqco.de/i:44049

Nomenclature

Rank

Species

Syllabication

sin.gu.la'ris

Etymology

L. fem. adj. singularis, alone, singular, referring to the fact that this is a free-living member

Nomenclatural type

INSDC Nucleotide: SHNN00000000.1

Reference strain

IMCC14734

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The species is established on the basis of taxonomic novelty analysis, and the type material is the genome IMCC14734.

Classification

Bacteria » Pseudomonadota » Gammaproteobacteria » Cellvibrionales » Halieaceae » Litorirhabdus » Litorirhabdus singularis^Ts

Parent

Litorirhabdus gtdb

Genomics

Accession

INSDC Nucleotide:SHNN00000000.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 96.91%
• Contamination: 1.52%
• Quality: 89.31

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 21 amino acids

Sequencing depth

260.4 ×

Source

• BioSample: SAMN10929371

Other features

• G+C Content: 54.2%
• Coding Density: 91.48%
• Codon Table: 11
• N50: 1,315,042 bp
• Contigs: 20
• Largest Contig: 1,895,525 bp
• Assembly Length: 4,835,928 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Tree: s__Litorirhabdus singularis
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Litorirhabdus singularis (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 9 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Li, Shanhui 9 months ago

Submitted by

Li, Shanhui 9 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Palmer, Marike 9 months ago

Date of priority

2024-03-15 09:07 PM (UTC)