General Medicine

La producción de limón persa (LP) es importante para el estado de Veracruz, México. Sin embargo, se ve afectada por el Huanglongbing (HLB), causada por Candidatus Liberibacter asiaticus (CLas), un patógeno biotrófico obligado. LP presenta un cierto nivel de tolerancia al HLB, por tanto, resulta relevante estudiar su respuesta de defensa mediada por ácido salicílico (SA). Tres genes con capacidad de participar en la ruta de respuesta por SA, conocidos como NtSABP, han sido identificados en Nicotiana tabacum; sin embargo, se desconoce la presencia y actividad de dichos genes en LP en respuesta al HLB. En este trabajo se identificaron proteínas homólogas tipo SABP en el transcriptoma de LP y se determinó su grado de expresión diferencial durante la infección con CLas. Se realizó un tBLASTn en el transcriptoma de LP usando como modelo secuencias de las proteínas SABP de cinco diferentes especies, incluyendo N. tabacum. Se reconstruyó y comparó el modelo 3D de las proteínas SABP de N. tabacum y C. latifolia. Con los análisis de tBLASTn, la reconstrucción filogenética y la estructura tridimensional se logró identificar el homólogo directo de cada gen NtSABP en LP. Interesantemente, los genes ClSABP1, ClSABP2 y ClSABP3 mostraron represión en plantas infectadas con CLas. En LP hay al menos un homólogo para cada gen NtSABP. Durante la infección por CLas, estos genes se encuentran ligeramente reprimidos.

El Huanglongbing (HLB) es una enfermedad considerada como la más destructiva para los cítricos en el mundo, es causada por Candidatus Liberibacter asiaticus (CLas) y diseminada por el vector Diaphorina citri. El HLB ha generado cuantiosas pérdidas económicas en la citricultura mundial. Todas las variedades comerciales de cítricos son susceptibles a esta enfermedad. La naturaleza de CLas como parásito intra celular estricto limitado al floema dificulta el estudio fitopatológico de la enfermedad. Las herramientas “ómicas”, que permiten aplicar análisis comparativos con enfoque masivos, han resultado útiles para describir la interacción entre el agente patogénico y diferentes especies de cítricos, generando conocimiento sobre las bases moleculares de la patogenicidad de CLas y de las respuestas de los hospederos ante la infección. Sin embargo, muchos procesos inmersos en la compleja interacción CLas-cítricos aún no son del todo comprendidos. En la presente revisión se resumen algunos de los principales hallazgos en la última década relacionados con los posibles mecanismos de patogenicidad de CLas a nivel molecular, así como de las respuestas transcripcionales y metabólicas inducidas en cítricos tolerantes o susceptibles, ante la infección. Este conocimiento es necesario para el diseño e implementación de nuevas estrategias para el manejo sustentable de la enfermedad.

Candidatus Liberibacter asiaticus (CLas) se ha dispersado rápidamente a las regiones productoras de cítricos en México, ocasionando impactos económicos y sociales diferenciados. En México, los principales avances en investigación se han centrado en el manejo del vector, Diaphorina citri y en estudios de la interacción de CLas con limón mexicano. Sin embargo, la variabilidad genética de la bacteria en regiones productoras de México se ha estudiado poco. Por lo que, en el presente estudio se analizó la variación de la población mexicana de CLas con procedimientos basados en PCR, secuenciación y electroforesis capilar a través de la detección del número de repeticiones en tándem (TRN) con dos marcadores STR, AGACACA y TACAGAA, el primero localizado en locus genómicos CLIBASIA_01645 y adenosina deaminasas. La distribución de los TRNs en la población mexicana de CLas en ambos loci mostraron variaciones con las poblaciones previamente reportadas en Florida, China y Brasil. Además, en la población mexicana se encontraron tres haplotipos, HA, HB y HC, siendo el primer reporte del haplotipo HC en las regiones citrícolas en México. Interesantemente, las subpoblaciones de CLas del Occidente y Noroeste son diferentes a la del Sureste.

Huanglongbing (HLB), caused by the Candidatus Liberibacter spp., is the most devastating disease in the citrus industry. HLB significantly affects and alters the microbial community structure or potential function of the microbial community of leaves and roots. However, it is unknown how the microbial community structure of the pericarp with different pigments is affected by Candidatus Liberibacter asiaticus (CLas). This study identified the enriched taxa of the microbial community in the citrus pericarp with normal or abnormal pigment and determine the effects of HLB on the pericarp microbial community using 16S rRNA-seq. The alpha and beta diversity and composition of microbial communities were significantly different between normal and abnormal pigment pericarp tissues of ripe fruits infected by CLas. Firmicutes, Actinobacteriota, Bacteroidota, Acidobacteriota, and Desulfobacterota dominated the pericarp microbiota composition in WDYFs (whole dark yellow fruits) samples. The relative abundance of most genera in WDYFs was higher than 1%, such as Burkholderia, and Pelomonas. However, with the exception of the HLB pathogen, the relative abundance of most genera in the abnormal-colored pericarp samples was less than 1%. CLas decreased the relative abundance of pericarp taxonomic. The predicted function of microbial was more plentiful and functional properties in the WDYF sample, such as translation, ribosomal structure and biogenesis, amino acid transport and metabolism, energy production and conversion, and some other clusters of orthologous groups (COG) except for cell motility. The results of this study offer novel insights into understanding the composition of microbial communities of the CLas-affected citrus pericarps and contribute to the development of biological control strategies for citrus against Huanglongbing.

AbstractBACKGROUNDCorn is one of the main crops grown globally to produce food for human consumption and animal feed, including raw materials for bioenergy. Effective pest management is critical for the economic viability of corn production. The leafhopper Dalbulus maidis and the diseases transmitted by it have become relevant to corn production. Our study aimed to determine environmental parameters that affect D. maidis populations and the impacts of pathogen dispersion on corn productivity under different rotation systems and sowing seasons.RESULTSThe population density of leafhoppers found in the studied crops was low but capable of establishing the diseases and spreading them widely in the crops. The leafhopper's highest occurrence was in the corn vegetative development stage, and its population peaks were earlier in the corn off‐season. The incidence of maize rayado fino virus and maize bushy stunt phytoplasma were higher in corn off‐season than in the growing season. The incidence of diseases was higher in the final stages of the cultivation cycle. Yield losses were significantly higher for maize bushy stunt phytoplasma and not significant for maize rayado fino virus.CONCLUSIONOur study observed that corn's physiological stage was the main factor influencing D. maidis dynamics. The occurrence of D. maidis at low densities was sufficient to ensure the efficient transmission and dissemination of maize rayado fino virus and maize bushy stunt phytoplasma, which had a higher incidence in the reproductive stage and the corn sowed off‐season. © 2023 Society of Chemical Industry.

An updated real-time multiplex quantitative polymerase chain reaction (qPCR) assay was designed and validated for the simultaneous detection of three ‘ Candidatus Liberibacter species’ (CLsp), ‘ Ca. Liberibacter asiaticus’ (CLas), ‘africanus’ (CLaf), and ‘americanus’ (CLam), associated with the huanglongbing disease of citrus. The multiplex assay was designed based on the qPCR assay published in 2006 by Li et al., considering all available CLsp 16S rRNA gene sequences in GenBank and the MIQE guidelines and workflow for qPCR optimization, which became available after 2006. When using the updated multiplex CLsp qPCR assay compared with singleplex qPCR, no significant increase in quantitative cycle (Cq) values was detected. The specificity and sensitivity of the updated qPCR assay was optimal, and measuring the intra- and interassay variations confirmed the reproducibility and repeatability of the assay. The assay was also successfully used with a large number of diverse samples at independent laboratories in four countries, thus demonstrating its transferability, applicability, practicability, and robustness as different qPCR reaction conditions or instruments had a minor effect on Cq values. This updated multiplex CLsp qPCR assay can be used in a variety of citrus surveys, germplasm, or nursery stock programs that require different pathogen detection tools for their successful operation. [Formula: see text] Copyright © 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

AbstractCandidatus Branchiomonas cysticola is recognized as the most prevalent bacterial agent causing epitheliocystis in Atlantic salmon (Salmo salar). Based on its partial 16S rRNA sequence, the bacterium has previously been found to be a member of Burkholderiales in the class Betaproteobacteria. Multilocus Sequence Analysis (MLSA) of the bacterium and 60 type strains of Betaproteobacteria using newly identified housekeeping genes (dnaK, rpoC, and fusA) and ribosomal subunit sequences (16S and 23S), instead supported the bacterium’s affiliation to Nitrosomodales. Taxonomic rank normalization by Relative Evolutionary Divergence (RED) showed the phylogenetic distinction between Cand. B. cysticola and its closest related type strain to be at the family level. A novel bacterial family named Branchiomonaceae has thus been proposed to include a monophyletic clade of Betaproteobacteria exclusively associated with epitheliocystis in fish.

Abstract CVPD disease (Huanglongbing) is the most severe citrus disease caused by the bacterium Cand. Liberibacter asiaticus. This pathogen lives in the phloem tissue of citrus plants and is transmitted through the vector Diaphorina citri and by grafting. The study aimed to know the presence of CVPD disease in Orange cv Selayar nurseries and mother tree gardens in the Selayar Islands Regency. The PCR test was carried out in the research using the Laboratory of Agricultural Biotechnology, Hasanuddin University. The DNA of the citrus leaves was extracted using the Genomic DNA Kit method and the DNA CLas was amplified using the polymerase chain reaction (PCR) with the primer pairs OI1-O12c. The results showed that the percentage of mother plants of orange cv. Selayar infected with CVPD-like symptoms were 10-21 %. The percentage of citrus seedlings with CVPD-like symptoms in 2 nurseries were 0.27% and 0.09%. The symptoms of CVPD disease have been confirmed using a PCR technique, which was successful in amplifying the DNA fragment of CLa measuring 1160 bp, although not all symptoms suspected of CVPD are confirmed positive.