Molecular Biology


Publications
314

Draft Genome Sequence of “ Candidatus Mycoplasma haemobos,” a Hemotropic Mycoplasma Identified in Cattle in Mexico

Citation
Martínez-Ocampo et al. (2016). Genome Announcements 4 (4)
Names
Ca. Mycoplasma haemobos
Abstract
ABSTRACT We present here the draft genome sequence of the first “ Candidatus Mycoplasma haemobos” strain found in cattle in Mexico. This hemotropic mycoplasma causes acute and chronic disease in animals. This genome is a starting point for studying the role of this mycoplasma in coinfections and synergistic mechanisms associated with the disease.

Draft Genome Sequence of “ Candidatus Phytoplasma oryzae” Strain Mbita1, the Causative Agent of Napier Grass Stunt Disease in Kenya

Citation
Fischer et al. (2016). Genome Announcements 4 (2)
Names
Ca. Phytoplasma oryzae
Abstract
ABSTRACT Phytoplasmas are bacterial plant pathogens with devastating impact on agricultural production worldwide. In eastern Africa, Napier grass stunt disease causes serious economic losses in the smallholder dairy industry. This draft genome sequence of “ Candidatus Phytoplasma oryzae” strain Mbita1 provides insight into its genomic organization and the molecular basis of pathogenicity.

Draft Genome Sequence of “ Candidatus Methanomethylophilus” sp. 1R26, Enriched from Bovine Rumen, a Methanogenic Archaeon Belonging to the Methanomassiliicoccales Order

Citation
Noel et al. (2016). Genome Announcements 4 (1)
Names
Abstract
ABSTRACT Here, we present the draft genome of “ Candidatus Methanomethylophilus” sp. 1R26, a member of the newly described Methanomassiliicoccales order of Euryarcheaota . The enrichment culture was established from bovine rumen contents and produced methane from trimethylamine and methanol. The draft genome contains genes for methanogenesis from methylated compounds.

Draft Genome Sequences of Two Novel Amoeba-Resistant Intranuclear Bacteria, “ Candidatus Berkiella cookevillensis” and “ Candidatus Berkiella aquae”

Citation
Mehari et al. (2016). Genome Announcements 4 (1)
Names
Ca. Berkiella aquae Ca. Berkiella cookevillensis
Abstract
ABSTRACT “ Candidatus Berkiella cookevillensis” and “ Candidatus Berkiella aquae” are obligate intranuclear endosymbionts of freshwater amoebae. Here, we present the draft genome sequences of these two bacteria, with total sizes of 2,990,361 bp and 3,626,027 bp, respectively.

Complete Genome Sequences of the Obligate Symbionts “ Candidatus Sulcia muelleri” and “ Ca Nasuia deltocephalinicola” from the Pestiferous Leafhopper Macrosteles quadripunctulatus (Hemiptera: Cicadellidae)

Citation
Bennett et al. (2016). Genome Announcements 4 (1)
Names
Ca. Sulcia muelleri
Abstract
ABSTRACT Two bacterial symbionts of the European pest leafhopper, Macrosteles quadripunctulatus (Hemiptera: Cicadellidae), were fully sequenced. “ Candidatus Sulcia muelleri” and “ Ca . Nasuia deltocephalinicola” represent two of the smallest known bacterial genomes at 190 kb and 112 kb, respectively. Genome sequences are nearly identical to strains reported from the closely related host species,

Whole-Genome Sequence of “ Candidatus Profftella armatura” from Diaphorina citri in Guangdong, China

Citation
Wu et al. (2015). Genome Announcements 3 (6)
Names
Ca. Profftella armatura
Abstract
ABSTRACT The genome of “ Candidatus Profftella armatura” strain YCPA from Diaphorina citri in Guangdong, China, was sequenced. The strain has a chromosome of 457,565 bp, 24.3% G+C content, 364 predicted open reading frames (ORFs), and 38 RNAs, and a plasmid, pYCPA54, of 5,458 bp with 23.9% G+C content and 5 ORFs.

Draft Genome Sequence of “ Candidatus Liberibacter asiaticus” from Diaphorina citri in Guangdong, China

Citation
Wu et al. (2015). Genome Announcements 3 (6)
Names
Ca. Liberibacter asiaticus
Abstract
ABSTRACT The draft genome sequence of “ Candidatus Liberibacter asiaticus” strain YCPsy from an Asian citrus psyllid ( Diaphorina citri ) in Guangdong, China, is reported here. The YCPsy strain has a genome size of 1,233,647 bp, 36.5% G+C content, 1,171 open reading frames (ORFs), and 53 RNAs.

Draft Genome Sequence of “ Candidatus Liberibacter asiaticus” from a Citrus Tree in San Gabriel, California

Citation
Wu et al. (2015). Genome Announcements 3 (6)
Names
Ca. Liberibacter asiaticus
Abstract
ABSTRACT The draft genome sequence of “ Candidatus Liberibacter asiaticus” strain SGCA5 from an orange citrus tree in San Gabriel, California, is reported here. SGCA5 has a genome size of 1,201,445 bp, a G+C content of 36.4%, 1,152 predicted open reading frames (ORFs), and 42 RNA genes.

Draft Genome Sequence of “ Candidatus Bacteroides periocalifornicus,” a New Member of the Bacteriodetes Phylum Found within the Oral Microbiome of Periodontitis Patients

Citation
McLean et al. (2015). Genome Announcements 3 (6)
Names
Ca. Bacteroides periocalifornicus
Abstract
ABSTRACT Here we present the draft genome of a distantly related member within the phylum Bacteriodetes , “ Candidatus Bacteroides periocalifornicus .” The draft genome sequence was assembled with metagenomic data from a patient with periodontitis. The closest relative has less than 68% average nucleic identity, supporting a novel family within Bacteriodetes .

De Novo Genome Sequence of “ Candidatus Liberibacter solanacearum” from a Single Potato Psyllid in California

Citation
Wu et al. (2015). Genome Announcements 3 (6)
Names
“Liberibacter solanacearum”
Abstract
ABSTRACT The draft genome sequence of “ Candidatus Liberibacter solanacearum” strain RSTM from a potato psyllid ( Bactericera cockerelli ) in California is reported here. The RSTM strain has a genome size of 1,286,787 bp, a G+C content of 35.1%, 1,211 predicted open reading frames (ORFs), and 43 RNA genes.