Woyke, Tanja


Publications
25

CitationNamesAbstract
Differential Expression of Core Metabolic Functions in Candidatus Altiarchaeum Inhabiting Distinct Subsurface Ecosystems Esser et al. (2025). Environmental Microbiology Reports 17 (3) “Huberarchaeum crystalense” Ca. Altiarchaeum crystalense “Altiarchaeum” Ca. Altiarchaea
Proposal of Patescibacterium danicum gen. Nov., sp. nov. in the ubiquitous ultrasmall bacterial phylum Patescibacteriota phyl. Nov Dutkiewicz et al. (2024). ISME Communications Patescibacterium danicum Ts Ca. Patescibacteria Patescibacteriota Patescibacteriia Patescibacteriales Patescibacteriaceae Patescibacterium
Genome-guided isolation of the hyperthermophilic aerobe Fervidibacter sacchari reveals conserved polysaccharide metabolism in the Armatimonadota Nou et al. (2024). Nature Communications 15 (1) Fervidibacter antarcticus Thermosaccharophagus gerlachensis Ts Fervidibacter canadensis Thermosaccharophagus yellowstonensis Fervidibacter sacchari Ts Fervidibacteria Fervidibacterales Fervidibacteraceae Fervidibacter Thermosaccharophagaceae Thermosaccharophagus Caldisaccharidevorator sinensis Ts Fervidibacter sinensis Fervidibacter japonicus Caldisaccharidevorator Caldisaccharidevorator malaysiensis Thermosaccharophagus tengchongensis
Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments Jiao et al. (2024). Microbiome 12 (1) Thermatribacteraceae Thermatribacter “Sediminicultor quartus” “Sediminicultor” “Immundihabitans aquiphilus” “Immundihabitans”
Differential expression of core metabolic functions inCandidatusAltiarchaeum inhabiting distinct subsurface ecosystems Esser et al. (2023). “Altiarchaeum” Ca. Altiarchaeum crystalense
Synthase-selected sorting approach identifies a beta-lactone synthase in a nudibranch symbiotic bacterium Džunková et al. (2023). Microbiome 11 (1) Doriopsillibacter californiensis Ts Doriopsillibacter Perseibacteraceae
Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota Seymour et al. (2023). Nature Microbiology 8 (4) Velaminicoccales Velaminicoccaceae Velaminicoccia Gygaellaceae Gygaellales Zapsychraceae Zapsychrales Tantalellales Tantalellaceae Gorgyraeia Gorgyraeales Gorgyraeaceae Aceulaceae Kaelpiaceae Kaelpiales Zapsychrus unditaenarius Velaminicoccus archaeovorus Ts Velaminicoccus Multiplicimicrobium Fredricksoniimonas aquilentivivens Ts “Amyimicrobium” Omnitrophia Omnitrophales Omnitrophaceae Pluralincolimonas frigidipaludosa Ts “Fontincolimonas calida” “Profunditerraquicola sanfordiae” Fredricksoniimonas borealis Duberdicusella sinuisediminis Ts Phelpsiimicrobium noxiivivens Ts Velesiimonas alkalicola Ts Aquitaenariimonas noxiae Ts Aquincolibacterium aerophilum Ts Aquincolibacterium lacustre Multiplicimicrobium inquinatum Ts Pegaeibacterium caenilacustre Ts Danuiimicrobium aquiferis Ts Taenariivivens baikalensis Ts Aquivivens invisus Ts Abzuiibacterium crystallinum Ts Makaraimicrobium Aquincolibacterium Pegaeibacterium Aquivivens Duberdicusellaceae Pluralincolimonadaceae Taenariiviventaceae Aquincolibacteriaceae Aquiviventaceae Duberdicusellales Ghiorseimicrobiales Aquitaenariimonadales Velesiimonadales Aquiviventales Undivivens Taenaricolales Undivivens industriae Ts Sherwoodlollariibacterium unditelluris Ts Sherwoodlollariibacterium “Fontincolimonas” Aquitaenariimonadaceae “Profunditerraquicola” “Profunditerraquicolaceae” “Amyimicrobium silvilacustre” Ghiorseimicrobiaceae Ghiorseimicrobium Ghiorseimicrobium undicola Ts Fredricksoniimonadaceae Fredricksoniimonas Phelpsiimicrobium Pluralincolimonadales Duberdicusella Velesiimonadaceae Velesiimonas Taenaricolaceae Taenaricola Taenaricola geysiri Ts Pluralincolimonas Aquitaenariimonas Makaraimicrobium thalassicum Ts Taenariivivens Danuiimicrobiaceae Danuiimicrobium Aquiviventia Abzuiibacterium Abzuiibacteriaceae Omnitrophus Omnitrophus fodinae Ts Omnitrophota
Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea Chadwick et al. (2022). PLOS Biology 20 (1) Ca. Methanovorans
Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota lineages Sun et al. (2021). ISME Communications 1 (1) Ca. Borrarchaeum weybense Jordiarchaeum Jordiarchaeum madagascariense Ts “Sifarchaeaceae” Jordiarchaeaceae “Sifarchaeales” Jordiarchaeales “Sifarchaeia” Jordiarchaeia “Borrarchaeaceae” Ca. Borrarchaeum “Sifarchaeum” Ca. Sifarchaeum marinoarchaea Ca. Sifarchaeum subterraneus “Sifarchaeota”
Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones Ruiz-Perez et al. (2021). Systematic and Applied Microbiology 44 (2) Ca. Anoxipelagibacter denitrificans Ca. Mesopelagibacter carboxydoxydans