Computer Science Applications


Publications
35

CitationNamesAbstract
Refinement of the “ Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration Stewart et al. (2024). mSystems 9 (3) “Accumulibacter”
A comprehensive overview of the Chloroflexota community in wastewater treatment plants worldwide Petriglieri et al. (2023). mSystems 8 (6) Kouleothrix Epilinea brevis Ts Epilinea Leptofilum Epilineaceae Epilineales Avedoeria danica Ts Avedoeria “Brachythrix odensensis” “Brachythrix” Defluviilinea gracilis Ts Defluviilinea Defluviilinea proxima Villigracilis vicinus Villigracilis adiacens Villigracilis propinquus Villigracilis Villigracilis affinis Villigracilis proximus Villigracilis saccharophilus Ts Villigracilaceae Hadersleviella danica Ts Hadersleviella Trichofilum aggregatum Ts Trichofilum Promineifilum glycogenicum Leptofilum gracile Ts Leptofilum proximum Leptovillus gracilis Ts Leptovillus affinis Leptovillus Flexicrinis affinis Ts Flexicrinis proximus Flexicrinis Flexifilum breve Ts Flexifilum affine Flexifilum Flexifilaceae Amarolinea dominans Fredericiella danica Ts Fredericiella Caldilinea saccharophila Ribeiella danica Ts Ribeiella Kouleothrix ribensis Ts Amarobacter glycogenicus Ts Amarobacter Amarobacillus elongatus Ts Amarobacillus
Metagenomics Revealed a New Genus ‘Candidatus Thiocaldithrix dubininis’ gen. nov., sp. nov. and a New Species ‘Candidatus Thiothrix putei’ sp. nov. in the Family Thiotrichaceae, Some Members of Which Have Traits of Both Na+- and H+-Motive Energetics Ravin et al. (2023). International Journal of Molecular Sciences 24 (18) Ca. Thiocaldithrix dubininis Ca. Thiothrix putei
Effects of Candidatus Liberibacter asiaticus infection on metagenome of Diaphorina citri gut endosymbiont Pan et al. (2023). Scientific Data 10 (1) Ca. Liberibacter asiaticus
Diversity Analysis and Function Prediction of Bacterial Communities in the Different Colored Pericarp of Citrus reticulata cv. ‘Shatangju’ Due to ‘Candidatus Liberibacter asiaticus’ Infection Wang et al. (2023). International Journal of Molecular Sciences 24 (14) Liberibacter Ca. Liberibacter asiaticus
Distribution, abundance, and ecogenomics of the Palauibacterales , a new cosmopolitan thiamine-producing order within the Gemmatimonadota phylum Aldeguer-Riquelme et al. (2023). mSystems Palauibacteraceae Palauibacterales Palauibacter Benthicola Humimonas Caribbeanibacter Carthagonibacter Indicimonas Kutchimonas Humimonas hydrogenitrophica Ts Caribbeanibacter nitroreducens Ts Benthicola marisminoris Ts Indicimonas acetifermentans Ts Benthicola azotiphorus Palauibacter soopunensis Ts Palauibacter scopulicola Palauibacter rhopaloidicola Palauibacter poriticola Palauibacter australiensis Palauibacter irciniicola Palauibacter denitrificans Carthagonibacter metallireducens Ts Kutchimonas denitrificans Ts Palauibacter polyketidifaciens Palauibacter ramosifaciens
Spatial Distribution and Temporal Dynamics of Candidatus Liberibacter Asiaticus in Different Stages of Embryos, Nymphs and Adults of Diaphorina citri Nian et al. (2023). International Journal of Molecular Sciences 24 (10) Liberibacter Ca. Liberibacter asiaticus
Metagenomic Discovery of “ Candidatus Parvarchaeales”-Related Lineages Sheds Light on Adaptation and Diversification from Neutral-Thermal to Acidic-Mesothermal Environments Rao et al. (2023). mSystems 8 (2) “Jingweiarchaeaceae” “Rehaiarchaeum fermentans” “Parvarchaeales” “Haiyanarchaeum thermophilum” “Jingweiarchaeum tengchongense” “Parvarchaeum tengchongense” “Haiyanarchaeum” “Jingweiarchaeum” “Haiyanarchaeaceae” “Jingweiarchaeales” “Rehaiarchaeum”
Identification of the Actin-Binding Region and Binding to Host Plant Apple Actin of Immunodominant Transmembrane Protein of ‘Candidatus Phytoplasma mali’ Boonrod et al. (2023). International Journal of Molecular Sciences 24 (2) Ca. Phytoplasma mali
Comparative Genomic Insights into the Evolution of Halobacteria -Associated “ Candidatus Nanohaloarchaeota” Zhao et al. (2022). mSystems 7 (6) Ca. Nanohaloarchaeota